Examples

Three end-to-end illustrations of a Claude Desktop session against alphafold-sovereign-mcp.

Example	What it shows
Variant triage on BRCA1 c.181T>G	Ensembl VEP + ClinVar + gnomAD + AlphaMissense + AlphaFold for a well-characterised pathogenic missense variant.
Target characterisation on EGFR	Open Targets, ChEMBL, gnomAD constraint, AlphaFold pLDDT for a HOT-tier drug target.
Drug discovery: Imatinib → BCR-ABL → CML	Multi-turn flow tying a drug to its target to the disease to the structural gatekeeper (T315I).

Status

These transcripts were captured live against the upstream APIs on 2026-06-08; the per-example pages record the exact run and the full payload is in each example's transcript.jsonl. They are point-in-time illustrations, not regression-gated.

The CI-diffed golden examples — the full pipeline run against BRCA1 c.5266dupC, TP53 R175H, and EGFR L858R on real recorded upstream responses, replayed offline and asserted against a pinned expected.json, each with a cited concordance analysis — are documented separately at Golden examples.

Reproducing locally

See Installation, configure Claude Desktop, restart, then paste the user prompt from any example into a new conversation.